RCA Embarks on a 41-day Operations and Maintenance Expedition

Watch live video here.

The numbers are remarkable for the Regional Cabled Array’s (RCA) Operations and Maintenance Expedition that left Newport, Oregon aboard the R/V Thomas G. Thompson on Sunday August 13.  Because of its complexity and the need to move 100 different instruments, the expedition consists of four legs over 41-days. The legs are separated by ~2-3 days port call at NOAA Marine Operation Center in Newport, Oregon. A science team of 12 is conducting the scientific operations, with their work supported by an engineering team of 20 (not all onboard). The Remotely Operated Vehicle (ROV) Jason, operated by a team of 12 from the Woods Hole Oceanographic Institution, is recovering and deploying instrumentation on the RCA for the duration of the expedition.

Finally, 25 students in the University of Washington’s VISIONS Program are onboard during various legs to gain real sea-going experience and work side by side with the scientific team.  Additionally, six other guest participants will be onboard, including a children’s author, engineers, and scientists.

The RCA annual expedition is always an exciting opportunity to watch real-life operations at sea.  Operations will be live-streamed here.  Details about the expedition, who’s involved, and what’s happening and planned can be found here. Daily updates can be found here.

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Soundscape Ecology Through Automated Acoustic-Based Biodiversity Indices

Soundscape Ecology Through Use of Automated Acoustic-Based Biodiversity Indices: A Test Using RCA Broadband Hydrophone Data. Adapted by OOI from Ferguson et al., 2023.

[media-caption path="https://oceanobservatories.org/wp-content/uploads/2023/07/Screenshot-2023-07-27-at-3.53.41-PM.png" link="#"]Figure a) Location of Regional Cabled Array broadband hydrophones used in this study. b) Acoustic Complexity Index associated with mammal calls, fish sounds, and anthropogenic noise. (After Ferguson et al., 2023).[/media-caption]

Ferguson’s et al., 2003 paper explores the use of myriad biodiversity indices, generated by automated acoustic classifications, using data from three of the Regional Cabled Array (RCA) broadband hydrophones. As the authors point out, human in-the-loop evaluation of marine species and anthropogenic noise from very large data volumes generated by passive acoustic sensors is formidable. Yet, identification of marine organisms and anthropogenic noise is increasingly important for biodiversity conservation and ecosystem monitoring. Automated biodiversity indices have been utilized in terrestrial environments, but only limited studies have used machine learning to study soundscape ecology in marine systems. This study used broadband hydrophone (HYDBBA) data from Slope Base on the Shallow Profiler Mooring (200 m water depth and ~ 100 km offshore), at Oregon Offshore (580 m water depth and ~ 72 km offshore), and the Oregon Shelf site (80 m water depth and ~ 16 km offshore) (Figure 28a) to examine seven diversity indices. Note, these study sites are valuable to making progress in soundscape ecology because the Cascadia Margin is characterized by very high biological productivity impacted by the California current, it is the site of intense shipping lanes, and because of the availability of continuous, real-time acoustic data streams provide by the RCA.

In this initial study, Ferguson et al., evaluated one month of data from the three sites: January 2017 for HYBDDA 103 and 106 and April 2018 for HYBDDA 105. Five minute files were used with 7,101 files for Slope Base, 4,725 files for Oregon Offshore, and 6,410 files for the Oregon Shelf. Data from these instruments had been previously annotated, providing ground truthing for machine learning results. Periods of vocalization of marine mammals occurred less frequently at Slope Base. Three months of data were reviewed to examine periods of mammal vocalizations and anthropogenic sounds.

Identifying the relationship between numerous acoustic indices and species characteristics is complex and requires attention to a significant number of factors and computation of multiple tests, as described in detail in this paper. The Acoustic Complexity Index (ACI, Figure 28b), is generated from an algorithm to quantify biological sounds based on intensity, it is the most commonly used index to assess acoustic indices in marine systems, and has been demonstrated useful in identifying species diversity.  Results from this work show that ACI measurements increased during vocalizations by dolphins and sperm whales. However, evaluation of the seven indices show that biodiversity cannot be explicitly determined from any single acoustic index. A significant finding from this study is that true assessment of large-scale ecosystem health and changes in indicator species, which may be due to differences in seasonal and interannual variability, requires co-located physical and chemical oceanographic data. The authors note that the RCA and Endurance Array instrumentation provides “an ideal scenario for accurately monitoring system health”.

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Ferguson, E.L., H.M. Clayton, and T. Sakai (2023) Acoustic Indices Respond to Marine Mammal Vocalizations and Sources of Anthropogenic Noise. Frontiers in Marine Science. 10:1025464; doi: 10.3389/fmars.2023.1025464.

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RCA Science and Data in K12 Classrooms

Dr. Kareen Borders, Executive Director, STEM Instruction and Outreach, South Kitsap School District and Executive Director of West Sound STEM Network and Dr. Deb Kelley, Professor, School of Oceanography, University of Washington and Director of the Regional Cabled Array, Ocean Observatories Initiative (OOI) teamed up to bring Regional Cabled Array science and data into K12 classrooms in northwest Washington.

After holding a series of curriculum development workshop, classroom units and lessons are now available on the Regional Cabled Array’s Interactive Ocean website. The teaching tools are are the products of a pilot program, funded by the National Science Foundation, that brought together a professional learning community of West Sound STEM Network K12 teacher leaders from northwest Washington school districts, and private and Tribal schools, in partnership with University of Washington, School of Oceanography scientists. They engaged in a series of K12 Ocean Observatories Initiative (OOI) education curriculum development workshops centered on marine science through use of Regional Cabled Array data.

This cohort of middle and high school teachers developed a series of OOI-integrated STEM Units utilizing stunning imagery from the OOI/ University of Washington Interactiveoceans website and live data from more than 150 instruments streaming from the Regional Cabled Array underwater observatory off the coast of Oregon. The use of rigorous and relevant instructional practices and culturally relevant pedagogical design connects students to technology as a tool for meaningful STEM learning and exploration of STEM career pathways.

The workshops resulted in cloud-based educational packages that cover Plate Tectonics and Volcanoes utilizing the Juan de Fuca Plate and Axial Seamount as prime examples, geohazards focused on seismicity along the Cascadia Subduction Zone and tsunamis, and climate change with an emphasis on heat waves.  To access and use the workshop material, visit RCA’s link here.

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Internal Tide Impacts on Ocean Circulation

Internal tides (ITs) have critical roles in determining the meridional overturning circulation and oceanic heat budget. The Regional Cabled and Coastal Endurance Arrays data are making it possible to identify the impacts of changes associated with the ITs.

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Marine Heatwaves

The Coastal Endurance, the Regional Cabled, and the Global Station Papa Arrays were key in identifying and monitoring the approach of a marine heatwave known as the “Blob” and its links to multiple ecosystem impacts on the US west coast.

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Accelerating Marine Ecological Research

Mid-trophic level organisms, such as zooplankton and forage fish, play a critical role in mediating energy transfer from primary production to top predators in the marine ecosystem. Using Coastal Endurance Array echosounders, scientists are observing long-term changes in the distribution and abundance of this important part of the marine food web.

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RCA Technical Wizards: The Saga of Repairing an RCA Primary Node

Chuck McGuire and Larry Nielson were able to take a cabled power and communications substation that sat inoperable on the dark, cold seafloor of the Pacific for two years and make it work again.  The odds were against them. There’s usually less than a 50-50 chance to make a complex technology operational again after this length of inactivity – inactivity compounded by the extreme pressure, cold temperature, and biofouling that occurs on the bottom of the Pacific Ocean. But these two engineering geniuses succeeded in repairing, rebuilding, and ultimately reconnecting Primary Node 1B (PN1B), which provides power to the Southern Hydrate Ridge portion of OOI’s Regional Cabled Array (RCA).

[embed]https://vimeo.com/user110037220/pn1b[/embed]

It was an arduous, complicated journey, fraught with delays outside of the engineers’ control. The recovery, repair, and reinstallation took two years to complete.   We share some of the highlights below for they illustrate the many challenges of operating seafloor cable infrastructure on an active tectonic plate in the Pacific Ocean.

Chuck McGuire, a senior principal engineer, is the chief engineer for the RCA and principal investigator for the engineering portion of the RCA, which is conducted at the University of Washington’s Applied Physics Laboratory (APL). Larry Nielson is a field engineer three at APL. They have been working on the RCA project since its inception in 2009 (Construction and deployment began in 2013).

When PN1B failed in 2020, the duo was stymied at first. They had to call in a variety of people with different skills to recover, rebuild, and redeploy it.

“Restoration of the PN1B is really a testament to the engineering that went into these nodes, which are good and work well under very harsh conditions, “explained McGuire. The Primary Nodes were designed and built by L3 Maripro with oversight by the APL Engineering team.

A Cable Fault Causes Power Loss

The saga began during RCA’s annual maintenance expedition in summer 2020.  Everything was smooth sailing until suddenly the science team aboard the R/V Thomas G. Thompson learned of a cable fault on the southern cable line, which had shorted out.  McGuire and team instantly went into troubleshooting mode and determined that the problem was in PN1B, which powers the Southern Hydrate Ridge section of the 900 kilometers of cable that comprise the RCA.

[media-caption path="https://oceanobservatories.org/wp-content/uploads/2023/03/202108-Recovery-of-Failed-PN1B-scaled.jpg" link="#"]Recovery of failed PN1B. Credit: NSF/OOI/UW.[/media-caption]

Luckily, they were able to divert the ship, the R/V Thomas G. Thompson, to the PN1B location to investigate. McGuire was on shore at the Shore Station in Oregon where he could troubleshoot the power system. McGuire worked with a team onboard to use the Remotely Operated Vehicle (ROV) Jason, operated by the National Deep Submergence Laboratory of the Woods Hole Oceanographic Institution, to unplug and plug back in the science interface assembly (SIA) that provides power and communication to secondary infrastructure on the array (e.g. extension cables, junction boxes, instruments, and moorings). The SIA was attached to and powered by PN1B. The SIA wasn’t the cause of the short, so the next step was a visual inspection of the cable with the ROV, tracing the cables back from the node to see if there was any external aggression or damage to that cable. None was seen. The next step was to determine where the power was lost.  By controlling the power from the Shore Station and sending “tones” (an oscillating frequency) down the cable, they were able to isolate the affected area.  They determined that the PN1B was no longer transmitting any power to the southern cable line running east of the node.

McGuire and Nielson set to figuring out how to replace the damaged node with a spare.  A specialized cable ship would be required. A request for proposal was released and the cable ship IT Integrity was secured.

With a cable ship lined up, the engineering team set about reconfiguring the Primary Node and a replacement SIA, which would be plugged into PN1B when both were back on the seafloor.  The assembly was complicated and required reconfiguration of all the optics in the SIA’s interior.  “Larry was able to get the SIA unassembled and rigged up in a way that made it possible for me to go in and remove and replace the components that needed to be replaced,” explained McGuire.  “All of this was unexpected work, which took time, and there was much aggravation. But Larry had some amazing solutions to some interesting rigging problems.”

The two engineers had to rely on their experience to tear down the SIA and then reconstruct it. Their challenge included having to create specialized tools to get into extremely tight spaces.  McGuire likened the work to repairing a car engine, where one slowly takes things off, working through the engine until finding the problem. The difference between the Primary Node and a car, however, was that spare parts to fix any issues found weren’t readily available and would have to be manufactured if needed.  Here, again, the skill, experience, and tenacity of this duo were called into play.  After taking the node apart and putting it back together again, they are now experts.

Their work was driven by a tight schedule needed to get the node and SIA ready for the next RCA recovery and deployment cruise in July 2021. The plan was to have the cable ship work simultaneously with the ROV Jason that was aboard the Thompson.  During the 2021 expedition, Jason successfully unplugged and recovered the SIA.  The cable ship Integrity then dropped a recovery line next to the node and Jason hooked the recovery line to the node. The cable ship recovered the node, returned it to the dock in Newport, where it picked up the replacement node. All seemed to be going well and on schedule.

While the transit and offloading were taking place, the team had tied the cables to a surface buoy to keep them accessible for reconnection to the new node.  When back at the buoy, engineers on the Integrity began the process of jointing—essentially splicing—the tied-off cables and attaching them to new cables connected to the replacement node. When all was connected, the next step was to use a cable winch to lower the cables down to the bottom.  Unfortunately, during deployment of the replacement PN1B, the system was damaged which resulted in a shunt fault. Tests indicated the damage was most likely in or very close to the cable termination assembly (CTA) making a repair with the node, at that time, not possible. The replacement PN1B was recovered to deck.

Rather than admit defeat, McGuire came up with the idea to bypass the replacement node and connect the cable downslope from the west to the eastern cable together to provide power and communication to Primary Nodes PN1C and PN1D.  McGuire figured that if optical power was too high, communications would fail since PN1B would not be in the system to attenuate the signal.  After a few quick calculations, McGuire determined what the attenuation needed to be in the line so that the power wasn’t too high to prevent communication down the cable.  The required attenuators were driven down to Newport while the ship headed to port to retrieve the critical parts.  The cables were then jointed with the attenuators in the optical circuit, restoring about 65 percent of the power and communications lost to the cable system initially and allowing RCA instruments and moorings at the Oregon Offshore and Oregon Shelf sites to become operational again. The maneuver was innovative and an engineering feat.

Upon returning to the lab, the team faced other challenges.  They had to reverse engineer a CTA. Because many of the parts could not be seen without destroying other critical parts, a CT scanner was used to scan its many parts, and point clouds (discrete set of data points in space) were developed. These cloud points were then fed into Solidworks, a software program, to create models of each part that needed to be machined or refurbished.

“CTAs are a very complex component,“ explained McGuire. “They terminate a cable into an object that must retain its watertight integrity at over 3000 meters water depth, while withstanding 35,000 pounds of pulling force and protecting the optical fibers in the cable.  Also, there’s not a rock solid on-land way to test its water tight integrity once it’s been built with the cable, ready for deployment.”

In getting ready for the next deployment attempt, the engineering duo encountered other obstacles from COVID-related delivery delays to manufacturers who no longer manufactured needed components.  They persevered. The team tore down the replacement node a second time and rebuilt it, with the same deliberate process given the first replacement node. Once completed, they took the replacement node through a complete battery of tests, making sure that it was capable of being powered up, could communicate with the SIA, and provide power to the cabled system. They then shipped the node to Portland to be loaded on a larger cable ship, the C.S. IT Intrepid.

In June 2022, the replacement node was again ready for deployment.  McGuire boarded the Intrepid with field engineer Paul Aguilar to oversee deployment.  After two days of bad weather, the ship finally was on site. The deployment went without incident except that the node landed 400 meters short of where it was to connect to the cable.  To reposition the node, PN1B would have to be lifted back on deck and four kilometers of cable would have to be “peeled” off the seafloor.  This would greatly increase the risk to PN1B and the cable, so the team came up with the idea of essentially creating an extension cord to make the cables meet.

“The node was working, the whole system was working except we couldn’t plug anything into it yet, because it was too far away from where it needed to be,” said McGuire.  “That was in the middle of June. We had until the end of July, (for the 2022 RCA recovery and deployment expedition) to acquire the parts, build an extension cable and come up with a plan to connect the two cable segments. “

As they do, McGuire and Nielson came up with a plan. By the July departure date, McGuire was aboard the Thompson to oversee the connection. Nielson was onshore to support logistics and attend to any contingent plans that might be needed.  The deployment included coming up with a new rigging configuration that required hanging 500 meters of cable off the bottom of the Remotely Operated Platform for Ocean Sciences (ROPOS), a 40 hp Science/Work Class ROV operated by the Canadian Scientific Submersible Facility, using Yale grips every 100 meters or so to allow for proper positioning once the cable was on the sea floor.  Using ROPOS, the team guided the end of the cable lit with a transponder and put the end right next to the Primary Node. They then “walked” the ship towards where the cable had to be plugged into the node, essentially laying out a long string in the water to the correct spot.

“And it worked on the first shot, which still amazes me today,” concluded McGuire.  “I cried and went to bed.”

 

 

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Axial Seamount Helping Scientists Forecast Eruptions

[media-caption path="https://oceanobservatories.org/wp-content/uploads/2023/03/Screen-Shot-2023-03-20-at-3.47.17-PM.png" link="#"]The Woods Hole Oceanographic Institution’s ROV Jason is instrumental in ongoing scientific investigations of Axial Seamount with instrumentation powered by the Regional Cabled Array. Credit: @WHOI.[/media-caption]

On March 20, 2023, Oregon Public Radio reported about scientists work at Axial Seamounts, a seamount and submarine volcano on the Juan de Fuca Ridge, about 480 kilometers off the coast of Oregon.  The story details how bottom pressure recorders connected to OOI’s Regional Cabled Array are helping reveal the inner workings of the Axial Seamount and helping scientists forecast when it might erupt next. Featured are Oregon State University Professor Bill Chadwick, University of North Carolina Professor Scott Nooner, Oregon State University Assistant Professor Jeff Beeson, and College of Charleston Assistant Professor Haley Cabannis.

Access the article here.

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Making the Ocean Accessible Through Sound

“Scientists are finding that people can sometimes pick up more information from their ears than the eyes can see.  And ears can perceive patterns in the data that the eyes can’t see,” said Amy Bower, a Senior Scientist at Woods Hole Oceanographic Institution and Principal Investigator for the Accessible Oceans project. “Adding sound to science allows more people to experience science, follow their curiosity, and make science more accessible to all. “

Bower joined forces with a multidisciplinary team to explore ways sound could be used to visualize data.  Funded by the National Science Foundation’s Advancing Informal STEM Learning Program, Bower and her team have been working for nearly two years on Accessible Oceans: Exploring Ocean Data through Sound.  Their goal is to inclusively design and pilot auditory displays of real ocean data.  They are implementing a process called sonification, assigning sound to data points.  Each member brings expertise to the task at hand.  Principal Investigator Bower is an oceanographer. Dr. Jon Bellona is a sound designer with specialization in data sonification at the University of Oregon.  Dr. Jessica Roberts and graduate student Huaigu Li, both at Georgia Tech, are Learning Sciences and human-computer interaction experts.  Dr. Leslie Smith, an oceanographer and specialist in ocean science education and communication at Your Ocean Consulting, Inc., rounds out the team.  Bower is a blind scientist, who lends a crucial perspective in the research and overall execution of the project.

To begin, the team chose to use datasets collected by the Ocean Observatories Initiative (OOI) that had previously been transformed into classroom-ready use by Smith and the Ocean Data Labs. The team is working first on three of these curated datasets: the 2015 eruption of Axial Seamount, the vertical migration of zooplankton during an eclipse event, and carbon dioxide exchange between the ocean and the atmosphere.

“Data is made of numbers. Sonification is basically just translating numbers into sound,” Bower explained. “So instead of seeing numbers go up and down on a graph, for example, you can hear them go up and down.”

To ensure an inclusive final product, the team has undertaken a co-design process in which a variety of stakeholders have been engaged for input throughout the process. The team interviewed both subject matter experts and teachers of the blind and visually impaired to ensure that both scientific and pedagogical needs were being met.  They then explored the integration of various auditory display techniques and ended up with a mix of data sonification, narration, and environmental sounds. The team put together a sample of five to six sonification examples for each data set, then surveyed a group of blind, visually impaired and sighted adults and students with science and non-science backgrounds. The survey’s purpose was to ask which sounds and which approaches might work best for both sighted and visually impaired listeners.

“We asked, for example, which of these sounds do you think best represents gases coming in and out of the ocean. The feedback was overwhelmingly in favor of a breathing sound,” said Bower. “As listeners will hear in the first example below that deals with carbon dioxide exchange between the ocean and the atmosphere, the breathing sound, with narration explaining what to expect, really brings the data to life.”

Accessible Oceans is a pilot and feasibility study for a museum exhibit that would introduce the broader public to what it’s like to experience ocean data through sound. At the end of this two-year project, the team intends to submit another proposal to design and build an exhibit that make ocean data come alive in a new and accessible way.

“As we’ve been working on this project, we’ve come to realize that to engage more people in science, technology, engineering and math, we can appeal to their ears as well as their eyes,” added Bower. “And I’m determined to help make science as accessible as possible for everyone.”

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To hear more about Amy Bower’s work as an oceanographer and her exploration of sonification, tune into this episode of The Science of Ocean Sounds, Tumble Science Podcast for Kids.

 

 

 

 

 

 

 

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